PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021285335.1
Organism
Herrania umbratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
Family bHLH
Protein Properties Length: 230aa    MW: 25644.1 Da    PI: 8.3889
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021285335.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH44.43.1e-143784254
                    HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
             HLH  2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
                    +++h+e+ErrRR+riN  +++Lr+llP+      +K +Ka+ L ++v+++++L
  XP_021285335.1 37 CKSHKEAERRRRQRINAHLSTLRSLLPNT-----TKTDKASLLAEVVHHVREL 84
                    789*************************9.....8***************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 230 aa     Download sequence    
MFPLKSFCGL ENNSPFNLTE GEDSIKTLSE KKSTEACKSH KEAERRRRQR INAHLSTLRS  60
LLPNTTKTDK ASLLAEVVHH VRELRRQVED VARRDVDGCC SKSQPELESW PFPGERDEAA  120
LSLYDKEAKL LKATVCCEDR PGLNHDLNRV IRSVQARVVR AEMTTVGGRT KSVVVMQWGG  180
DVEEIGPLER ALKDVVANRV SVLAHGEGRK RARVIASDNE NGSGFLVDSV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68810.12e-32bHLH family protein