PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021286211.1
Organism
Herrania umbratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
Family ERF
Protein Properties Length: 241aa    MW: 26675.1 Da    PI: 9.7168
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021286211.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP262.77.7e-2057106255
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                     +y+GVr+++ +g+W+AeIrdp+    + +r++lg+f tae Aa a+++a+++++g
  XP_021286211.1  57 HYRGVRQRP-WGKWAAEIRDPK----KaARVWLGTFETAEAAALAYDEAALRFKG 106
                     7********.**********94....45***********************9987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 241 aa     Download sequence    
MNAMVQALAQ VIGNNNNNNN NSNNNPFPPH DQHPTYQSDT ADQQNQSQDQ GNVRRRHYRG  60
VRQRPWGKWA AEIRDPKKAA RVWLGTFETA EAAALAYDEA ALRFKGSKAK LNFPERVQGR  120
SELGYLTTRR DVERAAALPP PFPPPSQATY PNISQYAHLL SGGSGNALNY ALPGAHGASP  180
FTSHATLSSS SSSTTLTSQQ QQQQQQQDYF GGFSLQFGGS SPPGSDPPKN RRDYDYYYSR  240
E
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G61890.14e-26ERF family protein