PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021286330.1
Organism
Herrania umbratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
Family B3
Protein Properties Length: 149aa    MW: 17108.9 Da    PI: 11.0718
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021286330.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B348.71.4e-15597292
                    EEE-..-HHHHTT-EE--HHH.HTT.---..--SEEEEEETTS-EEEEEE...EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS..SEE.. CS
              B3  2 fkvltpsdvlksgrlvlpkkfaeeh.ggkkeesktltledesgrsWevkliy.rkksgryvltkGWkeFvkangLkegDfvvFkldgr..sefel 92
                     k l  s +  ++rl++p k ++++   k +  + l+++desg  W+++l++ +k+  + v+++GW +Fv++++L++gD v ++ + +  s++++
  XP_021286330.1  5 SKLL--SQTDIRKRLSIPMKSFQSFpRFKAAHARNLQVKDESGGLWQFRLCIrKKNYLKPVFSTGWGKFVQSKNLQVGDKVKLYKEADqaSGAQF 97
                    5666..55556678********9999555566778***************8745555669*********************99954321355544 PP
Sequence ? help Back to Top
Protein Sequence    Length: 149 aa     Download sequence    
MKLFSKLLSQ TDIRKRLSIP MKSFQSFPRF KAAHARNLQV KDESGGLWQF RLCIRKKNYL  60
KPVFSTGWGK FVQSKNLQVG DKVKLYKEAD QASGAQFKIK AKRAVKIFGV VFGLQDIDAD  120
AINRKYRSVI HFDESGQKFH LSAFGSYAR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G01500.19e-08B3 family protein