PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021286332.1
Organism
Herrania umbratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
Family B3
Protein Properties Length: 121aa    MW: 13860.8 Da    PI: 5.1167
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021286332.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B341.72.1e-13494188
                    EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTE...EEE-TTHHHHHHHHT--TT-EEEEEE-.SS.S CS
              B3  1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgr...yvltkGWkeFvkangLkegDfvvFkld.gr.s 88
                    f k lt+sdv ks  l +p + +++  +++ + + + + d+ g+ W++ + ++++++     v++ GW +F + +++++gD+v F+ + ++ +
  XP_021286332.1  4 FSKPLTKSDVEKS--LLIPTHSFDTLPLEEGQFFNMNVVDSAGNAWTFPCFIQQNDEIkgpSVISVGWLKFLRNKDVRVGDTVFFYQIsWDdN 94
                    8899*******99..9**********999*********************774444444679************************4434433 PP
Sequence ? help Back to Top
Protein Sequence    Length: 121 aa     Download sequence    
MALFSKPLTK SDVEKSLLIP THSFDTLPLE EGQFFNMNVV DSAGNAWTFP CFIQQNDEIK  60
GPSVISVGWL KFLRNKDVRV GDTVFFYQIS WDDNCTGTQF RIEVKRKIRL LGQDIWAAVD  120
Q
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G01500.16e-07B3 family protein