PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021286333.1
Organism
Herrania umbratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
Family B3
Protein Properties Length: 134aa    MW: 15543.9 Da    PI: 10.6363
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021286333.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B3469.3e-155102396
                     EE-..-HHHHTT-EE--HHH.HTT...---..--SEEEEEETTS-EEEEEE..EEETTE....EEE-TTHHHHHHHHT--TT-EEEEEE-SS.SE CS
              B3   3 kvltpsdvlksgrlvlpkkfaeeh...ggkkeesktltledesgrsWevkliyrkksgr....yvltkGWkeFvkangLkegDfvvFkldgr.se 89 
                     k+lt+ dv+   rl++p k ++++   +gk   +++    d++g+sW + l+ r++ ++     vl++GW+ +v+a+gLk++D v++++++r + 
  XP_021286333.1   5 KELTKTDVGV--RLSFPMKSLKAFefpQGK--DKVEFEAIDSTGKSWIFGLSRRNSERHshpkPVLSSGWRAYVQAKGLKQNDRVIIHYEKRdKA 95 
                     6777777775..59*******999877444..456788899**********7655555588999**************************88677 PP

                     E..EEEE CS
              B3  90 felvvkv 96 
                      + ++k+
  XP_021286333.1  96 LKTRFKI 102
                     7777766 PP
Sequence ? help Back to Top
Protein Sequence    Length: 134 aa     Download sequence    
MLVEKELTKT DVGVRLSFPM KSLKAFEFPQ GKDKVEFEAI DSTGKSWIFG LSRRNSERHS  60
HPKPVLSSGW RAYVQAKGLK QNDRVIIHYE KRDKALKTRF KIQAQRRSPK KLKLFGKEVE  120
IWDDLENLQS DVAA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G36080.14e-06B3 family protein