PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021286334.1
Organism
Herrania umbratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
Family B3
Protein Properties Length: 105aa    MW: 11897.7 Da    PI: 8.2004
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021286334.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B345.71.1e-144102198
                     EEEE-..-HHHHTT-EE--HHH.HTT...---..--SEEEEEETTS-EEEEEE..EEETTE.EEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE. CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeeh...ggkkeesktltledesgrsWevkliyrkksgr.yvltkGWkeFvkangLkegDfvvFkldgrsefe 91 
                     f kvlt+ dv ++  l++p + +++    +g+++ ++ ++  de+g +W++ +++r +     v+ kGW++Fv++++Lk+gD+vv++ +++s+++
  XP_021286334.1   4 FRKVLTSTDVERR--LSFPEQSLADLppfEGSPAIDFPVM-DDEDGSVWTFCCTFRAGVFPrPVIVKGWSQFVRSKELKSGDMVVLYKEEDSGAR 95 
                     7899977777764..9*******999**988888875555.88**********88444322499***********************88889999 PP

                     .EEEEE- CS
              B3  92 lvvkvfr 98 
                     +++kv +
  XP_021286334.1  96 YKIKVKK 102
                     9999865 PP
Sequence ? help Back to Top
Protein Sequence    Length: 105 aa     Download sequence    
MAIFRKVLTS TDVERRLSFP EQSLADLPPF EGSPAIDFPV MDDEDGSVWT FCCTFRAGVF  60
PRPVIVKGWS QFVRSKELKS GDMVVLYKEE DSGARYKIKV KKSSN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G36080.22e-09B3 family protein