PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021286348.1

Organism

Herrania umbratica

Taxonomic ID

108875

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania

Family

SRS

Protein Properties

Length: 210aa MW: 23093 Da PI: 8.8146

Description

SRS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021286348.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF702	179.6	1.3e-55	11	143	4	154
DUF702 4 gtasCqdCGnqakkdCaheRCRtCCksrgfdCathvkstWvpaakrrerqqqlaaasskaaasaaeaaskrkrelkskkqsalsstklssaeskk 98 g+ +CqdCGnqakk+Ca++RCRtCC+s+gf+C+thvkstWvpa++rr+r+qql++ ++ ++ + +++kr re+ s++ XP_021286348.1 11 GGPRCQDCGNQAKKNCAYMRCRTCCRSKGFECQTHVKSTWVPAYRRRQRHQQLSSVPQQ--HHLSVHNPKRLREN----------------PSST 87 6679*******************************************9999887443..33444555555543................2334 PP DUF702 99 eletsslPeevsseavfrcvrvssvddgeeelaYqtavsigGhvfkGiLydqGlee 154 le +lP+e+ s+a frcvrvss+dd+ +++aYqt v+i GhvfkGiLydqG++e XP_021286348.1 88 GLELGNLPAELTSPATFRCVRVSSIDDAADQYAYQTIVNIEGHVFKGILYDQGPAE 143 567778*********************************************975 PP

Sequence ? help Back to Top
Protein Sequence Length: 210 aa Download sequence
MMMMSQGAGF GGPRCQDCGN QAKKNCAYMR CRTCCRSKGF ECQTHVKSTW VPAYRRRQRH 60 QQLSSVPQQH HLSVHNPKRL RENPSSTGLE LGNLPAELTS PATFRCVRVS SIDDAADQYA 120 YQTIVNIEGH VFKGILYDQG PAEGHHHTVG ECSSRGTHQP NQINAAALTT ATMTTSTTSV 180 AAETLLPFAY ASPFNAFMSA GTQFFLHPKS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G19790.1	1e-58	SRS family protein