PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021286359.1

Organism

Herrania umbratica

Taxonomic ID

108875

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania

Family

WRKY

Protein Properties

Length: 163aa MW: 18934.2 Da PI: 9.2634

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021286359.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	106.4	1.4e-33	84	142	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK+vk+s+fprsYYrCt+++C+vkk+v+rs++d ++v++tYeg H+h+ XP_021286359.1 84 LDDGYRWRKYGQKTVKNSKFPRSYYRCTHKECNVKKQVQRSSKDDEIVVTTYEGIHTHP 142 59********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 163 aa Download sequence
MENYHILFPD GSSASPSLLT MTNHRSYLQG NDVITTTKVG NQCEDLDAKD VSSESEVKVG 60 KKGDNKGMRK HKYAFQTRSQ VDILDDGYRW RKYGQKTVKN SKFPRSYYRC THKECNVKKQ 120 VQRSSKDDEI VVTTYEGIHT HPVEKFSENF EQILRQMQTY NPL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G13080.1	5e-51	WRKY family protein