PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021286425.1
Organism
Herrania umbratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
Family B3
Protein Properties Length: 119aa    MW: 13780.2 Da    PI: 10.8817
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021286425.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B349.29.7e-16496189
                    EEEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEE.TTS-EEEEEE..EEETTE....EEE-TTHHHHHHHHT--TT-EEEEEE-SSSE CS
              B3  1 ffkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltled.esgrsWevkliyrkksgr....yvltkGWkeFvkangLkegDfvvFkldgrse 89
                    f+k l++ d    +rl++p k + ++   ++ + +++  ++d esg +W++++  rkk++      vl+kGW+eFv +++L++gD v F+  g++ 
  XP_021286425.1  4 FLKNLKKTDLE--KRLTIPSKSL-HCfpPLSDKHTVDFAVKDeESGHVWRFRIYTRKKRNNnilkPVLSKGWREFVCSKQLRVGDRVAFYSAGEQV 96
                    56666444433..56*******9.557*555557889999998999*******5566666678889999*********************665433 PP
Sequence ? help Back to Top
Protein Sequence    Length: 119 aa     Download sequence    
MAIFLKNLKK TDLEKRLTIP SKSLHCFPPL SDKHTVDFAV KDEESGHVWR FRIYTRKKRN  60
NNILKPVLSK GWREFVCSKQ LRVGDRVAFY SAGEQVGAVK YRVKVERPLK IFGASVFPS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G01500.13e-09B3 family protein