PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021286447.1
Organism
Herrania umbratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
Family ZF-HD
Protein Properties Length: 176aa    MW: 19698.3 Da    PI: 4.2108
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021286447.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer69.74.9e-223183256
     ZF-HD_dimer  2 ekvrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRre 56
                    ++v+Y eC++N     G ++vDGC Ef++   e g  +a+ C ACgCHR+FHR+ 
  XP_021286447.1 31 QGVTYMECRRNVSLPAGHYSVDGCSEFLKR--EAGRENAMLCDACGCHRSFHRKV 83
                    6799************************98..6689*****************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 176 aa     Download sequence    
MDDNNGAGHE QGQAQANAVR RRINRQAVGE QGVTYMECRR NVSLPAGHYS VDGCSEFLKR  60
EAGRENAMLC DACGCHRSFH RKVLPTLYSE ATHYLVFNDI PSVRPMPQPQ QPPIPLVPQP  120
ELPHEQVAES ESEGEEEEEE RSGTDEESED RSELDSESEV DEVEMINGGE KDSKED
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G18835.18e-13ZF-HD family protein