PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021286612.1
Organism
Herrania umbratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
Family MYB_related
Protein Properties Length: 95aa    MW: 10858.2 Da    PI: 8.8961
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021286612.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding33.31.2e-101256244
                     SSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHH CS
  Myb_DNA-binding  2 grWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrw 44
                     g+WT+   +l+ +a +q+ ++   +W+ +a+ +g g+t++ +k ++
   XP_021286612.1 12 GSWTAKQNKLFEKALAQYDKDtpdRWHNVAKAVG-GKTAEAVKRHY 56
                     89********************************.**********9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 95 aa     Download sequence    
MASSSLESRD SGSWTAKQNK LFEKALAQYD KDTPDRWHNV AKAVGGKTAE AVKRHYEILI  60
EDLKHIESGR VPIPNYRSTG NADEEERLIR YLKLQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75250.26e-38MYB_related family protein