PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021286711.1
Organism
Herrania umbratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
Family ERF
Protein Properties Length: 217aa    MW: 24834.9 Da    PI: 9.3344
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021286711.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP255.41.5e-174391355
             AP2  3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                    y+GVr ++ +g+Wv+eIr+p++   + r++lg+f tae+Aa+a++ a  +++g
  XP_021286711.1 43 YRGVRMRS-WGKWVSEIREPRK---KSRIWLGTFPTAEMAARAHDVASMAIKG 91
                    9****998.**********843...6*******************99887776 PP
Sequence ? help Back to Top
Protein Sequence    Length: 217 aa     Download sequence    
MDLKYIKQSF RKKRSIREKR LMEANERGEK SFKKGKAYRH PAYRGVRMRS WGKWVSEIRE  60
PRKKSRIWLG TFPTAEMAAR AHDVASMAIK GNSAYLNFPE SAHELPRPAS SSRRDIQEAA  120
NKAAYAMIDQ HNAMIEVKTE PSQDEMPIPQ SPSSTTMSCE THGSPSSQSV DSDSMWFDLP  180
DLSLEANSSH RFGYTSCWQQ AGIDTEFQFE ESMGWDK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G44940.11e-49ERF family protein