PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021286910.1
Organism
Herrania umbratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
Family bHLH
Protein Properties Length: 89aa    MW: 9956.26 Da    PI: 4.725
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021286910.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH20.21.1e-0618561755
                    HHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH 17 NsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
                       + +L++llP++ + ++++ s  ++L +++ YI++Lq
  XP_021286910.1 18 SALILNLQTLLPQPNRCRNGRESATQVLSETCSYIRKLQ 56
                    556889*******8899*********************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 89 aa     Download sequence    
MSSQGSRASN KITDDELSAL ILNLQTLLPQ PNRCRNGRES ATQVLSETCS YIRKLQAEID  60
DLSERLSQCL GSMDMTSLDA EILRNLLRQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G47710.12e-21bHLH family protein