PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021287090.1

Organism

Herrania umbratica

Taxonomic ID

108875

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania

Family

bZIP

Protein Properties

Length: 161aa MW: 18124.2 Da PI: 6.974

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021287090.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	45	2.3e-14	31	89	5	63
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 ++ +r+++NRe+ArrsR RK++ ++ L v +L +eN++ + +++ ++++ ++++e+ XP_021287090.1 31 RKRKRMISNRESARRSRMRKQKHLDDLMAQVTQLRKENHQIITRINITTQHYLNVEAEN 89 6789******************************************9999999988877 PP

Sequence ? help Back to Top
Protein Sequence Length: 161 aa Download sequence
MASSSGTSSG SSTLLQNSGS EEDLQALMDE RKRKRMISNR ESARRSRMRK QKHLDDLMAQ 60 VTQLRKENHQ IITRINITTQ HYLNVEAENS VLKAQANELS HRLQSLNEIN SFLNANNGSN 120 FGVEDATSLA FAEPADSFLN PFNLAYLNQP IMASADNMFQ Y

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	31	52	RKRKRMISNRESARRSRMRKQK
2	44	51	RRSRMRKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G75390.1	4e-54	bZIP family protein