PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021287100.1
Organism
Herrania umbratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
Family B3
Protein Properties Length: 133aa    MW: 15389.1 Da    PI: 10.6256
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021287100.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B345.61.2e-14141001390
                     TT-EE--HHH.HTT.---..--SEEEEEE.TTS-EEEEEE..EEETTE.....EEE-TTHHHHHHHHT--TT-EEEEEE-.SS.SEE CS
              B3  13 sgrlvlpkkfaeeh.ggkkeesktltled.esgrsWevkliyrkksgr.....yvltkGWkeFvkangLkegDfvvFkld.gr.sef 90 
                     ++rl++p + + ++  ++ +  ++  ++d esg +W++++  rk+ +       vltkGW+eFv +++Lk+gD v F+   ++    
  XP_021287100.1  14 EKRLTIPSRALPSFpPLSDKHMVDFAVRDeESGHVWKFRIYTRKNMNNnkylkPVLTKGWREFVCSKKLKVGDRVAFYSAeEQaGAV 100
                     3679*******9999444456789999998999*******554444445566799***********************441333444 PP
Sequence ? help Back to Top
Protein Sequence    Length: 133 aa     Download sequence    
MAIVLKNLKK TDIEKRLTIP SRALPSFPPL SDKHMVDFAV RDEESGHVWK FRIYTRKNMN  60
NNKYLKPVLT KGWREFVCSK KLKVGDRVAF YSAEEQAGAV EYRVKVQRPL KIFGAMVFPS  120
EESLFVNVAK KLV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G01500.15e-09B3 family protein