PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021287110.1
Organism
Herrania umbratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
Family ERF
Protein Properties Length: 234aa    MW: 26116.9 Da    PI: 8.2146
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021287110.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP250.84.3e-1655104255
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                     +y GVr+++ +grWvAeI+d s   ++ r +lg+f+ aeeAa a++ a++ l+g
  XP_021287110.1  55 RYLGVRQRP-SGRWVAEIKDSS---QKLRLWLGTFDRAEEAALAYDSAARLLRG 104
                     689******.7*********42...36***********************9998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 234 aa     Download sequence    
MDSMDSSRTI PSHQSQSPCK NHISIPLETE SFHEDSEKRG KKLTKRGNND NTGRRYLGVR  60
QRPSGRWVAE IKDSSQKLRL WLGTFDRAEE AALAYDSAAR LLRGRNAKTN FQYHGVMNTY  120
EENCNLLGKN PRLYQLLQLT ITKNHARSTS LKSIGTVPWQ NQNVGNKVDP VDFDTLVEET  180
IFCSSTSDHD EGSNNKLSQL SLGSSKVYSS VVVAPSFCTS LDQGGEEGKN CQDA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G19790.11e-16ERF family protein