PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021287177.1
Organism
Herrania umbratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
Family ZF-HD
Protein Properties Length: 228aa    MW: 25822.2 Da    PI: 8.3364
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021287177.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer77.61.6e-243384258
     ZF-HD_dimer  2 ekvrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRreve 58
                    e++rYkeC++NhAas G +++DGCgEf+       + +a+ CaACgCHR+FHR+e+ 
  XP_021287177.1 33 ERIRYKECRRNHAASFGRYVFDGCGEFIGC-----NDDAFMCAACGCHRSFHRKEPP 84
                    679*************************98.....5689***************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 228 aa     Download sequence    
MAGEASKDVI KIEASEIEPI SVQRCSSPVP ETERIRYKEC RRNHAASFGR YVFDGCGEFI  60
GCNDDAFMCA ACGCHRSFHR KEPPNNFNNA ALPPPHQPTP PQRPLLSPLP LASHNGLTGE  120
TTLFPRDRNI DAGSETLSGA EVEEPKDTKK RAKRTRITME QKTKMMRFAD KLGWRPQKHD  180
DAEVQQFCEE VGITKRVFVV WLNNNRRRKD SMRSEEQACV HAVAENNK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G24660.12e-32ZF-HD family protein