PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021287608.1
Organism
Herrania umbratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
Family NAC
Protein Properties Length: 189aa    MW: 21767.2 Da    PI: 4.6953
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021287608.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM129.33e-4081261128
             NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 
                     lppGfrF Ptdeelvv++L++k++  +++  +vi+++d+y ++Pw+L+ k+ ae ++wyf+s+r         +nr t++gyWk  g+d++v+++
  XP_021287608.1   8 LPPGFRFYPTDEELVVHFLQRKAALLPCHP-DVIPDLDLYPYDPWELDGKALAEGNQWYFYSRRT--------QNRNTSNGYWKPMGTDEPVVNS 93 
                     79*************************999.99**************977778899******984........58999***************** PP

             NAM  96 kgelvglkktLvfykgrapkgektdWvmheyrl 128
                     ++++vg+kk L fy g+ p g kt+W+m+eyrl
  XP_021287608.1  94 SSKKVGMKKYLLFYIGEGPAGIKTNWIMQEYRL 126
                     *******************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 189 aa     Download sequence    
MGDNNVNLPP GFRFYPTDEE LVVHFLQRKA ALLPCHPDVI PDLDLYPYDP WELDGKALAE  60
GNQWYFYSRR TQNRNTSNGY WKPMGTDEPV VNSSSKKVGM KKYLLFYIGE GPAGIKTNWI  120
MQEYRLSDCD SSSSRSSKRR AHSKIDHSKW VVCRVYERNS DDDDDGTELS CLDEVFLSLD  180
DLDEISLPN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G64530.12e-85NAC family protein