PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021287795.1
Organism
Herrania umbratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
Family ERF
Protein Properties Length: 227aa    MW: 24970.8 Da    PI: 8.2202
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021287795.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP268.31.5e-213282155
             AP2  1 sgykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                    ++y+GVr ++ +gr++AeIrd ++    ++r++lg+f++aeeAa+a++aa+++l+g
  XP_021287795.1 32 PRYRGVRKRP-WGRFAAEIRDpWK----KTRVWLGTFDSAEEAARAYDAAARSLRG 82
                    68********.**********883....5*************************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 227 aa     Download sequence    
MRRGRGAAAA AAAATAVATK PALEPNGSIK EPRYRGVRKR PWGRFAAEIR DPWKKTRVWL  60
GTFDSAEEAA RAYDAAARSL RGPKAKTNFP INSSNIPAFP FETHHHNNEG FIDQQRLYPM  120
GDFQDPEVNP QRPTRSSMSS TVESFSGPRP AQPPQKSTDF AVVSTRKYHP RTPPVVPEDC  180
HSDCDSSSSV VDDGDIASSS CRKTLPFDLN FPPLDDVDDL QCTALCL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G50640.11e-42ERF family protein