PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021287813.1
Organism
Herrania umbratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
Family NF-YB
Protein Properties Length: 187aa    MW: 19947.2 Da    PI: 6.519
Description NF-YB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021287813.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YB185.25e-5833128297
           NF-YB   2 reqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrelege 96 
                     +eqdrflPianvsrimkk+lPanakisk+aketvqecvsefisf+t+easdkcq+ekrktingddllwa++tlGfedyveplkvyl+++re+ege
  XP_021287813.1  33 KEQDRFLPIANVSRIMKKALPANAKISKEAKETVQECVSEFISFITGEASDKCQKEKRKTINGDDLLWAMTTLGFEDYVEPLKVYLQRFREMEGE 127
                     79********************************************************************************************9 PP

           NF-YB  97 k 97 
                     k
  XP_021287813.1 128 K 128
                     7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 187 aa     Download sequence    
MADSDTESGG AQNNGNNNAS NATGNSSDLS SLKEQDRFLP IANVSRIMKK ALPANAKISK  60
EAKETVQECV SEFISFITGE ASDKCQKEKR KTINGDDLLW AMTTLGFEDY VEPLKVYLQR  120
FREMEGEKTA VARDKDAPLG GGVGGGGMYG MMVHQHQGHV YGSSGFHQMG SSGLGKGGPG  180
NNLVGPR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G14540.13e-67NF-YB family protein