PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021288005.1
Organism
Herrania umbratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
Family NAC
Protein Properties Length: 300aa    MW: 34183 Da    PI: 7.307
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021288005.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM173.56.3e-54111371129
             NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 
                     lppGfrFhP+deelv++yL +kv++++  l + + evd++k+ePwd+p++++ + kewyf+s+rd+kyatg r+nrat+sgyWkatgkd+++ls 
  XP_021288005.1  11 LPPGFRFHPRDEELVCDYLMRKVATSTDAL-QLMIEVDLNKCEPWDIPETARVGGKEWYFYSQRDRKYATGLRTNRATASGYWKATGKDRAILS- 103
                     79************************9777.8899*************9888999***************************************. PP

             NAM  96 kgelvglkktLvfykgrapkgektdWvmheyrle 129
                     kg+lvg++ktLvfy+grapkg+ktdWvmhe+rle
  XP_021288005.1 104 KGTLVGMRKTLVFYQGRAPKGRKTDWVMHEFRLE 137
                     999****************************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 300 aa     Download sequence    
MSNISLVEAK LPPGFRFHPR DEELVCDYLM RKVATSTDAL QLMIEVDLNK CEPWDIPETA  60
RVGGKEWYFY SQRDRKYATG LRTNRATASG YWKATGKDRA ILSKGTLVGM RKTLVFYQGR  120
APKGRKTDWV MHEFRLEGPL APPKLSTLKE DWVLCRVFYK NTEITAKPRS MGSCYDDTGS  180
SPLPPLMDSY ITFDQTQPNL DEYEQVPCFS DFSQSQTNPF FTNTTYMEPS LPAKTQPALR  240
QMPMNACLDS FPCDKKVIKA VLNHLTKLDS YLNVKESPSF GEGCSESYLS EVGMPDIWNH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G56010.21e-128NAC family protein