PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021288066.1
Organism
Herrania umbratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
Family ERF
Protein Properties Length: 214aa    MW: 23675.5 Da    PI: 9.1556
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021288066.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP264.91.6e-2060110256
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 
                     +y+GVr ++ +gr++AeIrdp++   ++r++lg+f+taeeAa+a++aa+++++g+
  XP_021288066.1  60 RYRGVRKRP-WGRYAAEIRDPRK---KTRVWLGTFDTAEEAARAYDAAAREFRGA 110
                     59*******.**********843...6*************************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 214 aa     Download sequence    
MRFVAQLPLY KPAPLISVFR KPTSVSYILQ FEKEERKAMA PRSKPSPVNP ISDPTSKEIR  60
YRGVRKRPWG RYAAEIRDPR KKTRVWLGTF DTAEEAARAY DAAAREFRGA KAKTNFTDNN  120
NNDFNRSPSQ SSTVESSSPP PLDLTLASAC FSLPVTTHRP VSFFDAFASA GSGCPDTCGA  180
QSDSDSSSSV VDFEGGVQRR VFDLDLNLLP AEMD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G53170.17e-21ERF family protein