PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021288315.1
Organism
Herrania umbratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
Family ERF
Protein Properties Length: 202aa    MW: 22488.4 Da    PI: 7.4146
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021288315.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP261.61.8e-193787155
             AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                    s y+GVr +k +g+Wv+eIr+p   gk++r++lg+f t+e+Aa+a++ a++ l+g
  XP_021288315.1 37 STYRGVRKRK-WGKWVSEIREP---GKKTRIWLGSFETPEMAAAAYDVAALHLRG 87
                    56*****999.**********8...557*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 202 aa     Download sequence    
MYLIYMKQST SSRKKQGINT YMEGKNSSSA TRGGVSSTYR GVRKRKWGKW VSEIREPGKK  60
TRIWLGSFET PEMAAAAYDV AALHLRGREA RLNFPELIDC LPRPPSSNGE DIRMAAHEAA  120
LRVRTNAAGS SSEAGASSSS VGPVTVRLSP TQIQAINESP LDSPKMWMQM SEALMMDEAM  180
MFCNENGENE WDDMQNDSLW DP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G71450.11e-57ERF family protein