PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021288332.1
Organism
Herrania umbratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
Family ERF
Protein Properties Length: 197aa    MW: 21539.4 Da    PI: 5.2715
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021288332.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP251.32.9e-1656105255
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                     +ykGVr + ++g+Wv+eIr+p   g +  r +lg++ t+e+Aa a++ a  +l+ 
  XP_021288332.1  56 KYKGVRCR-RWGKWVSEIRVP---G-TqERLWLGSYSTPEGAAIAHDIAHYCLRR 105
                     8****955.5**********8...3.35*********************999985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 197 aa     Download sequence    
FLPLTFCFFN LYSLHFPSPF FNLGYTFCSL ASSLSCVSCA LEKTMSAGAV EESIRKYKGV  60
RCRRWGKWVS EIRVPGTQER LWLGSYSTPE GAAIAHDIAH YCLRRPSSLN GLNFPSMLPP  120
NLNVNMSPKS VQKAASDAGM AVDAQMIVIS NETKASENSG VIVGMETESW ENDSSGSWEG  180
SVGKEGEALS ISVEDYL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G71520.14e-47ERF family protein