PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021288334.1
Organism
Herrania umbratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
Family NAC
Protein Properties Length: 194aa    MW: 22339.7 Da    PI: 9.118
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021288334.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM71.13e-22431511112
             NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykv...ePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkev 92 
                     +ppGfrF Ptd++l+ +yL +kv+g+ l+  e++++++iy +   ePw++  ++ ++ ++ y F+k ++k  +gkr +r++ +g+Wk + +  +v
  XP_021288334.1  43 VPPGFRFAPTDDQLILHYLSNKVKGELLPS-EAVTDCEIYGHqdkEPWKIF-SM-TSPRKFYVFTKLKNK-GKGKRIERTAGRGTWKGQRT-DPV 132
                     69*************************999.889999999876669****6.44.456789999998776.68**************8866.789 PP

             NAM  93 lskkgelvglkktLvfykgr 112
                     ++++g+++g kk +vf  gr
  XP_021288334.1 133 KDSDGNHIGFKKLFVFE-GR 151
                     999*************6.55 PP
Sequence ? help Back to Top
Protein Sequence    Length: 194 aa     Download sequence    
MTKQLELDHS FHQSTMTELL LSPTHDELDH VYLYFDHSTS TYVPPGFRFA PTDDQLILHY  60
LSNKVKGELL PSEAVTDCEI YGHQDKEPWK IFSMTSPRKF YVFTKLKNKG KGKRIERTAG  120
RGTWKGQRTD PVKDSDGNHI GFKKLFVFEG RCQTMSMTLA HARVSLLTQS DYVLCAIRNK  180
KPLNPLLNKL DMIC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G27410.28e-18NAC family protein