PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021288409.1

Organism

Herrania umbratica

Taxonomic ID

108875

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania

Family

G2-like

Protein Properties

Length: 283aa MW: 31534.5 Da PI: 9.2302

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021288409.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	104.8	5e-33	27	81	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kprlrWt +LH+rFv+av++LGG++kAtPk++l+lm++kgLtl+h+kSHLQkYRl XP_021288409.1 27 KPRLRWTADLHDRFVDAVTKLGGPDKATPKSVLRLMGMKGLTLYHLKSHLQKYRL 81 79****************************************************8 PP
2	Myb_DNA-binding	67.5	2.3e-21	29	80	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT+++++++vdav++lGg+ t+k++ r mg kg+tl+++ks++qky+ XP_021288409.1 29 RLRWTADLHDRFVDAVTKLGGPdkaTPKSVLRLMGmKGLTLYHLKSHLQKYR 80 89*************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 283 aa Download sequence
MERLSYGGGG GGNFGYENGV VMTRDPKPRL RWTADLHDRF VDAVTKLGGP DKATPKSVLR 60 LMGMKGLTLY HLKSHLQKYR LGQQARKQNA VDQNKDNGGS SYVQFSNHSP GTITNSPRAD 120 NEQRQIPVAA AVITPLEAQK TLQEQLEVQE KLQMRVEAQG RYLQAILEKA QKGLSFDINC 180 EGNVEETRAE LTNFNLALSS LMENVNGGAD RKPNMVQMND VPKKATSCSA FQNYGVGERE 240 RNKDVKLKVE GDSINFDLNT KDSFEFVAVN GNELQSLMFS YKR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G45580.1	4e-76	G2-like family protein