PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021288476.1
Organism
Herrania umbratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
Family B3
Protein Properties Length: 121aa    MW: 13827 Da    PI: 9.4389
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021288476.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B336.11.2e-11497192
                    EEEE-..-HHHHTT-EE--HHH.HTT.....---..--SEEEEEETTS-EEE.EEE..EEETTE...EEE-TTHHHHHHHHT--TT-EEEEEE-SSS CS
              B3  1 ffkvltpsdvlksgrlvlpkkfaeeh.....ggkkeesktltledesgrsWe.vkliyrkksgr...yvltkGWkeFvkangLkegDfvvFkldgrs 88
                    f+kvl   dv +++++ +p +f+ +h     g   +      + d sg++We + + y ++ ++    v+++ W +Fv a+gL +gD ++F+++++ 
  XP_021288476.1  4 FCKVL--GDVDAKKQMAIPSDFV-QHlpphgG-GYTH--YFPVVDMSGKVWEnFGY-YIRSVEShpkPVFQGDWHQFVLAKGLVAGDRIIFRMERDA 93
                    78999..99**************.55598852.3223..57889*******84566.64444444669************************98876 PP

                    EE.. CS
              B3 89 efel 92
                    ++ +
  XP_021288476.1 94 NGVP 97
                    6655 PP
Sequence ? help Back to Top
Protein Sequence    Length: 121 aa     Download sequence    
MESFCKVLGD VDAKKQMAIP SDFVQHLPPH GGGYTHYFPV VDMSGKVWEN FGYYIRSVES  60
HPKPVFQGDW HQFVLAKGLV AGDRIIFRME RDANGVPRYT IAAQKRLLRK LFGQAIWGPE  120
F