PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021288477.1
Organism
Herrania umbratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
Family B3
Protein Properties Length: 122aa    MW: 14297.7 Da    PI: 11.1068
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021288477.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B343.84.6e-144100193
                     EEEE-..-HHHHTT-EE--HHH.HTT....---..--SEEEEEETTS-EEE.EEE..EEETTE...EEE-TTHHHHHHHHT--TT-EEEEEE-SS CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeeh....ggkkeesktltledesgrsWe.vkliyrkksgr...yvltkGWkeFvkangLkegDfvvFkldgr 87 
                     f+k lt+ dv k+  + +p  f  eh    +    +++ l ++d sg+ We + + +r+k++     v++++W+++++a+ Lk gD ++F+++++
  XP_021288477.1   4 FQKHLTKVDVKKQ--MAIPSGFR-EHlpryE--GGRTMSLLVRDVSGNHWEnFGYYIRRKGKDypkPVFQRNWRKYARAKSLKPGDKIIFRVEEN 93 
                     8999989888887..8******7.6669553..457889***********84777446666667889************************9887 PP

                     .SEE..E CS
              B3  88 .sefelv 93 
                      +++ ++
  XP_021288477.1  94 aTNGAPR 100
                     7777665 PP
Sequence ? help Back to Top
Protein Sequence    Length: 122 aa     Download sequence    
MRSFQKHLTK VDVKKQMAIP SGFREHLPRY EGGRTMSLLV RDVSGNHWEN FGYYIRRKGK  60
DYPKPVFQRN WRKYARAKSL KPGDKIIFRV EENATNGAPR YTIAAQRKIM ILGTIVVWTG  120
EI