PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021288544.1
Organism
Herrania umbratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
Family ERF
Protein Properties Length: 143aa    MW: 16086.2 Da    PI: 10.8071
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021288544.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP264.81.7e-2078126255
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                     +y+GVr+++ +grW+AeIrd    g+r r +lg+f+taeeAa a+++a+ kl+g
  XP_021288544.1  78 RYRGVRQRP-WGRWAAEIRD----GRRMRLWLGTFDTAEEAAVAYDQAAVKLRG 126
                     8********.**********....336*************************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 143 aa     Download sequence    
MSSPPLPNQK PQQPFRRRIV RITVTDADAT DSSSDDETTS PKRNQNLPKK KLVNEITIGM  60
STKENDVIAG PSQGKVKRYR GVRQRPWGRW AAEIRDGRRM RLWLGTFDTA EEAAVAYDQA  120
AVKLRGPNAP TNFKLLDCNV VHS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G27950.13e-19ERF family protein