PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021288585.1
Organism
Herrania umbratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
Family bHLH
Protein Properties Length: 217aa    MW: 25075.6 Da    PI: 7.0635
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021288585.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH35.71.5e-112573555
                    HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH  5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
                     +++E++RR+++++ + +L +llP    ++++ ls  +   +Av+YIksLq
  XP_021288585.1 25 RKIIEKNRRNHMKNLYCRLNSLLPRH--TSKEPLSLPDQIDEAVNYIKSLQ 73
                    589**********************7..37777*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 217 aa     Download sequence    
MELQMVYSVH KEMERSSCSS AKIERKIIEK NRRNHMKNLY CRLNSLLPRH TSKEPLSLPD  60
QIDEAVNYIK SLQTRLKESR EKKESLTGRK RSHRCANTTA AEAAAVSRSP EISINETDSA  120
IEVVLMTGQD CQFMFYEMIR ILHEEGAQVL NANFSVLGNT IVHIVHAEIG AHMFTFGAEK  180
IKEKLNKFVH NSSSEQQLQQ ELWDFEIHPE TWDFPIM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G20970.17e-37bHLH family protein