PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021288653.1
Organism
Herrania umbratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
Family MYB_related
Protein Properties Length: 75aa    MW: 8727.45 Da    PI: 4.1165
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021288653.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding361.6e-112769246
                     SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding  2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46
                     + ++++E+ l+++ +++ G + W++Ia +++ gRt++++  +w++
   XP_021288653.1 27 LQFSEDEETLIIRMFNLVGER-WTLIAGRIP-GRTAEEIEKYWNT 69
                     579******************.*********.***********96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 75 aa     Download sequence    
MAESEHSSSE DASMDSIEDH NKQDSELQFS EDEETLIIRM FNLVGERWTL IAGRIPGRTA  60
EEIEKYWNTR YSTSQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46410.11e-17MYB_related family protein