PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021288657.1
Organism
Herrania umbratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
Family NAC
Protein Properties Length: 187aa    MW: 21550.6 Da    PI: 9.2634
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021288657.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM93.43.8e-29411671128
             NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykv...ePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkev 92 
                     +ppG+rF Ptd+el+ +yL +kv+g++l+  e++++++iy +   ePw++  ++ ++ ++ y F+k ++k  +gkr +r++ +g+Wk + +  +v
  XP_021288657.1  41 VPPGYRFAPTDDELILHYLSNKVKGEPLPS-EAVTDCEIYGHqdkEPWKIF-NM-TSPRKFYVFTKLKNK-GKGKRIERTAGRGTWKGQRT-DPV 130
                     69**************************99.889999999876669****6.44.356788999998776.68**************8866.789 PP

             NAM  93 lskkgelvglkktLvfy.kgrapkgektdWvmheyrl 128
                     ++++g+++g kk +vf  kg+  + +k +W+mhey+l
  XP_021288657.1 131 KDSDGNHIGFKKLFVFEvKGDGANNVKGHWLMHEYSL 167
                     999*************979999999**********97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 187 aa     Download sequence    
MTTQLQLDHS FHQSAMPELL LSPTHDHLHY LYFDHSTFTW VPPGYRFAPT DDELILHYLS  60
NKVKGEPLPS EAVTDCEIYG HQDKEPWKIF NMTSPRKFYV FTKLKNKGKG KRIERTAGRG  120
TWKGQRTDPV KDSDGNHIGF KKLFVFEVKG DGANNVKGHW LMHEYSLLTQ VSFLPILSPP  180
LHAFVRG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G04070.23e-22NAC family protein