PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021288713.1
Organism
Herrania umbratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
Family NZZ/SPL
Protein Properties Length: 323aa    MW: 34253.7 Da    PI: 9.2031
Description NZZ/SPL family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021288713.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NOZZLE86.46.6e-272932138314
          NOZZLE  38 e.tkksrgrkpgsktaqqkqkkptlrgmgvaklerfiieeekkklvvatvgd.tssvaai.sntatrlpvpvdrgvvlqgfps............ 117
                     e  k  +grkp  k   qk  k   rgmgva+ler +++e+ kk++ at    t+  +   s+      vpv + v   g p             
  XP_021288713.1  29 EfVKSNKGRKPTGKGPYQK--KQPQRGMGVAQLERLRLQEKWKKMTEATTTTiTTPTTQLpSDPIGTATVPVLHAVANYGVPMminggnggllgw 121
                     5345669******988764..4457********************6665543144444441445566778999*********9999999998888 PP

          NOZZLE 118 ....slgssrilc.ggvg..sgqvmidp.....vispwgfvetsatthelssisnpqmynassnnrcdtcfkkkrldgdqnnvvrsngggfskyt 200
                          l  +r++  gg g   gqv++       v    g ve+s    elss+++ q       +rcd cfkkkr +gd+   vr ng gf ++ 
  XP_021288713.1 122 gdtaGLVMQRVVGnGGFGglNGQVLVGApgsvqVACGAGVVEASK---ELSSMPKLQHC---KPDRCDVCFKKKRCNGDN---VRFNG-GFNQFG 206
                     876655557876426666445999986324333667789999988...****9987754...5678*************9...9*996.699999 PP

          NOZZLE 201 mipppmngydeyl.lqsdhhqrsqgfl..ydqriaraasvsaasasinpyfneatnltgsreefgsvlegnprngsrgv.keyeffpgkydervs 291
                      i p   g d++l  ++d++q  +  +  +  r ar+a+  a    i    ne+ +        gs        g++ v  eyeffpgk    +s
  XP_021288713.1 207 QILPSK-G-DHFLgWNQDNNQNINEEIngFSARAARSAAAYAGQMNI----NETVEVVA-IHRKGSS------TGTGSVlMEYEFFPGKSSRSTS 288
                     986543.3.33331455655654443312567888888555555544....55444433.3333444......45555428********987665 PP

          NOZZLE 292 kv.....akvaslvg.dcspn....tidlslkl 314
                            a+++ +vg + s       +dlslkl
  XP_021288713.1 289 SKewelpAEASVAVGgEASYAnasnCVDLSLKL 321
                     422222245566665244421244499999997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 323 aa     Download sequence    
MATSLTLLTP NANNPTAKAL EDEARPAVEF VKSNKGRKPT GKGPYQKKQP QRGMGVAQLE  60
RLRLQEKWKK MTEATTTTIT TPTTQLPSDP IGTATVPVLH AVANYGVPMM INGGNGGLLG  120
WGDTAGLVMQ RVVGNGGFGG LNGQVLVGAP GSVQVACGAG VVEASKELSS MPKLQHCKPD  180
RCDVCFKKKR CNGDNVRFNG GFNQFGQILP SKGDHFLGWN QDNNQNINEE INGFSARAAR  240
SAAAYAGQMN INETVEVVAI HRKGSSTGTG SVLMEYEFFP GKSSRSTSSK EWELPAEASV  300
AVGGEASYAN ASNCVDLSLK LSY