PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021288938.1
Organism
Herrania umbratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
Family MYB_related
Protein Properties Length: 193aa    MW: 22332.8 Da    PI: 4.7543
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021288938.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding30.21e-0946702348
                     -HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding 23 tWktIartmgkgRtlkqcksrwqkyl 48
                     +W+ Iar+++ gRt++++k++w+++l
   XP_021288938.1 46 RWSMIARRLP-GRTDNEIKNYWRTHL 70
                     5*********.************996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 193 aa     Download sequence    
MAISVLKRKR SSYNFMSDGA TSESVPSSWI FFFSFPSLKS SILFCRWSMI ARRLPGRTDN  60
EIKNYWRTHL RKKALIQEQE NFQFGRDNGK QLFLFQEDGS SAQNYNGESY KPCKDILDTE  120
NSCYDVVGLS DFTLTSSPYQ TRLSDLIPEF PSDQSEIKSQ EDCNSSDSRY CYPAWISEEN  180
DLWGCSGSLW NME
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G53200.11e-20MYB family protein