PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021289023.1

Organism

Herrania umbratica

Taxonomic ID

108875

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania

Family

BES1

Protein Properties

Length: 212aa MW: 24036.5 Da PI: 10.2127

Description

BES1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021289023.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF822	127.3	1.8e-39	70	148	4	79
DUF822 4 grkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpl...eea 79 r pt+ Er +nk+RERrRRa+a i+aGL+++Gnyklpk+aD n+ lkALc+eAGw ve+DGt yrk + p ++ XP_021289023.1 70 YRFPTENERQKNKQRERRRRAVAQNIFAGLKEHGNYKLPKHADTNDLLKALCQEAGWYVEEDGTIYRKKTVPStilAAS 148 589*****************************************************************99998543222 PP

Sequence ? help Back to Top
Protein Sequence Length: 212 aa Download sequence
MVQNRTLHFA LFWCFILYLY SHFQNSKGAK LKRKGMAGEK KTTLRGCIKK SKGPWIVHRA 60 TKDGGIVTRY RFPTENERQK NKQRERRRRA VAQNIFAGLK EHGNYKLPKH ADTNDLLKAL 120 CQEAGWYVEE DGTIYRKKTV PSTILAASIE NGEAKDQDYC TCNDHGNVLR ASGTFLSVGQ 180 SQECNGINLM LSLSVSNSLT RHVPEKEGMV SN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G50750.1	8e-20	BES1 family protein