PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021289254.1

Organism

Herrania umbratica

Taxonomic ID

108875

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania

Family

TCP

Protein Properties

Length: 214aa MW: 23129.9 Da PI: 6.849

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021289254.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	112.1	7.7e-35	48	116	8	73
TCP 8 hskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssa...sec 73 ++++hTkv+gR+RRvR++a+caar+F+L++eLG+ +d++tieWLl+qa+p+i+++tg+++ +a +c XP_021289254.1 48 SKDRHTKVNGRGRRVRMPALCAARIFQLTRELGHRSDGETIEWLLRQAEPSIIAATGSGTVPAaheISC 116 79********************************************************55555332333 PP

Sequence ? help Back to Top
Protein Sequence Length: 214 aa Download sequence
MGSEMALHKF STANHNHQNS NINSVVSDES TPKTQLALPT RKPVSSLSKD RHTKVNGRGR 60 RVRMPALCAA RIFQLTRELG HRSDGETIEW LLRQAEPSII AATGSGTVPA AHEISCPAGP 120 TTTSASPPSV SCQVHPVGVG SGSVVAGMYT MTAPPPNCRL DLCQPVGFQY SAVGRSGYQH 180 MPFTALLLQP TTAAEEVEER QQVEDEEEEI RHHE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G37000.1	6e-46	TCP family protein