PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021289601.1
Organism
Herrania umbratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
Family E2F/DP
Protein Properties Length: 259aa    MW: 28970.6 Da    PI: 7.542
Description E2F/DP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021289601.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1E2F_TDP71.97.3e-2361140471
         E2F_TDP   4 ksLrlltqkflklleksee.givtlnevakeLvse...............dvknkrRRiYDilNVLealnliekkekneirwkg 71 
                      +Lr+++ +   +++k e+ g +t+ eva+e+++e               ++kn rRR+YD+lNVL+al++i++ ek+eirwkg
  XP_021289601.1  61 GGLRQFSVM---VCKKLESkGSTTYAEVADEIIEEfataqtntarsldefHEKNVRRRVYDALNVLMALDIITR-EKKEIRWKG 140
                     589999999...****9999******************************999*********************.*******98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 259 aa     Download sequence    
MDNPYLEDSP SCEQSPVATP SNASTSGSAC GMNQSAVKQK NASADVVDGT MRKKVSRMPG  60
GGLRQFSVMV CKKLESKGST TYAEVADEII EEFATAQTNT ARSLDEFHEK NVRRRVYDAL  120
NVLMALDIIT REKKEIRWKG LSTTTQAKSL EELKALHVQL MARIAKKAAY LKDVEEQTSP  180
HATVEIEISE DMQLVHLDFN STPFSLHDDA YVLKLMRYYQ RPESRNTSQS SSIHSSSSSC  240
KATRVSKPFY WNSETETPR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G02470.31e-71E2F/DP family protein