PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021289733.1
Organism
Herrania umbratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
Family B3
Protein Properties Length: 208aa    MW: 23404.7 Da    PI: 7.8657
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021289733.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B353.15.7e-17121197172
                     EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHH CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkan 72 
                     f k+lt+sd+++ g +++p+ +ae++         ++ +  t+  +d +g++W++++iyr++++r++lt+GW+ Fv+ +
  XP_021289733.1 121 FAKTLTQSDANNGGGFSVPRYCAETIfprldysADPPVQ--TILAKDVHGETWKFRHIYRGTPRRHLLTTGWSTFVNHK 197
                     89****************************996555555..89*********************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 208 aa     Download sequence    
MITFMDSKEK LKEMEKCLDS QLWHACAGGM VQMPSVNAKV FYFPQGHAEH ACGPVDFRNC  60
PRIPAYVLCR VASVKFMADP ETDEVFAKIR LIPVGTNEPD FEDDGIGSIH GNETQEKPAS  120
FAKTLTQSDA NNGGGFSVPR YCAETIFPRL DYSADPPVQT ILAKDVHGET WKFRHIYRGT  180
PRRHLLTTGW STFVNHKKGW KAQVEKKI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G28350.14e-97ARF family protein