PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021290482.1
Organism
Herrania umbratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
Family FAR1
Protein Properties Length: 246aa    MW: 27954.4 Da    PI: 7.02
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021290482.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR192.45.8e-2982169291
            FAR1   2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 
                     fYn+YA++vGF +r+sk ++s+r+g+ + r +vC+keg+r ++k++  k  r+raetr+gC+a++ v+k ++gkw+vtk+++eH+H+l+p
  XP_021290482.1  82 FYNAYATRVGFIIRVSKLSRSRRDGSAIGRALVCNKEGFRMPDKRE--KIVRQRAETRVGCRAMILVRKVSSGKWVVTKFVKEHTHPLTP 169
                     ******************************************9988..9**************************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 246 aa     Download sequence    
MEFGVHGDVN GGMVLNSVQV EASSMDNESE AVESPVEGTF QQGVNEKMDR TSPEGDDIPE  60
GIPADEPYVG QEFESEAAAH AFYNAYATRV GFIIRVSKLS RSRRDGSAIG RALVCNKEGF  120
RMPDKREKIV RQRAETRVGC RAMILVRKVS SGKWVVTKFV KEHTHPLTPG KGRRDCIYDQ  180
YPNEHNKIRE LTQQLANEKK RAATYKRHLE LIFEQIEEHN ESLSKKIQHI VDSVREMENK  240
EQQSHV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G59470.21e-101FAR1 family protein