PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021290971.1
Organism
Herrania umbratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
Family FAR1
Protein Properties Length: 211aa    MW: 24290.8 Da    PI: 8.1302
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021290971.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR184.32e-2646134290
            FAR1   2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 
                     fY+eYA++vGF +r+ + ++s+r+g+i  r++ C+keg+  + + k    r++r++tr gCka++++k +k+gkw++t+++++HnH+l+
  XP_021290971.1  46 FYDEYARRVGFVMRVMSCRRSERDGRILARRLGCNKEGYCVSIRGKFGPVRKPRPSTREGCKAMIHIKFDKSGKWVITRFVKDHNHPLV 134
                     9**************************************99999998****************************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 211 aa     Download sequence    
MDLDEGAEAI ESFTGGETVA VPCEGDSIVE PHEGMEFESE DAAKIFYDEY ARRVGFVMRV  60
MSCRRSERDG RILARRLGCN KEGYCVSIRG KFGPVRKPRP STREGCKAMI HIKFDKSGKW  120
VITRFVKDHN HPLVVAPREA RQTMDEKDKK IQELTAELRN KKRLCAAYQE QLTAFMKIVE  180
EHSNQLSKKV QNVVNNLKEY ESIELELLQH R
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G43280.11e-114FAR1 family protein