PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021291025.1
Organism
Herrania umbratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
Family bHLH
Protein Properties Length: 158aa    MW: 17557.1 Da    PI: 8.7377
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021291025.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH15.82.6e-0548871054
                    HHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
             HLH 10 rrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
                    + R +++ +++  L++l+ +      +K + a++L +A+eYI+ L
  XP_021291025.1 48 KDRKEKLGERIVALQQLVSPY-----GKTDTASVLLEAMEYIRFL 87
                    6788889999999****9999.....9****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 158 aa     Download sequence    
MQTLCSCEEG REIGKMMENK RSPCSVDHSS FTSLASKRQK ADLSISTKDR KEKLGERIVA  60
LQQLVSPYGK TDTASVLLEA MEYIRFLHEQ VKVLSAPYLQ TAPTNNMQDV EHYSLRSRGL  120
CLVPISCTAG VARSNGADIW APIKTTSPKF DKAISQFN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G05710.36e-67bHLH family protein