PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021291087.1
Organism
Herrania umbratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
Family FAR1
Protein Properties Length: 244aa    MW: 28445 Da    PI: 7.1818
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021291087.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR184.12.3e-2675166191
            FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerr.traetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 
                     +fY+ Y++++GF++r++++++s ++++i+ r+fvCskeg+r+e+  k+e +   +r+ tr gC+a+l++  ++ gkw+++ + +eHnHel+p
  XP_021291087.1  75 EFYEMYGRRMGFTIRNNRTRRSLKDNSIIGREFVCSKEGFRAEKYIKREYRVCpSRPATREGCNAMLRIAAKDGGKWVIYGFIKEHNHELNP 166
                     6******************************************9988443333599*********************************975 PP
Sequence ? help Back to Top
Protein Sequence    Length: 244 aa     Download sequence    
MASTSGQGLN SSRNYRQWLA ETFDGHETLD DELSDSNVDG NGNLINPLDQ NFPMTLEARE  60
PYTGMEFESA EDAREFYEMY GRRMGFTIRN NRTRRSLKDN SIIGREFVCS KEGFRAEKYI  120
KREYRVCPSR PATREGCNAM LRIAAKDGGK WVIYGFIKEH NHELNPSKIP PRRSHRIAFC  180
EDEKDLKIRE LSTELHREKK KSAAYLEQLQ MVLKYVEEHT QRLSLKVDVV SNILRELESV  240
DHIF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G07500.11e-46FAR1 family protein