PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021291147.1
Organism
Herrania umbratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
Family GATA
Protein Properties Length: 147aa    MW: 16115.3 Da    PI: 10.4796
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021291147.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA58.77.7e-194074135
            GATA  1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35
                    C+ Cgt+kTplWR gp g+k+LCnaCG++ rkk++
  XP_021291147.1 40 CADCGTSKTPLWRGGPAGPKSLCNACGIRSRKKRR 74
                    ********************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 147 aa     Download sequence    
MLDPSEKGSE SEDRSKKYSE GISVKETQNQ SFSNETKKTC ADCGTSKTPL WRGGPAGPKS  60
LCNACGIRSR KKRRAILGLN KGEDKKSKRG SNSSSKNLGD NLKQRLLSLG REGLMQRSTV  120
EKQRRKLGEE EQAAVLLMAL SYGSVYA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G06740.12e-54GATA family protein