PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021291240.1

Organism

Herrania umbratica

Taxonomic ID

108875

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania

Family

CAMTA

Protein Properties

Length: 223aa MW: 24943.3 Da PI: 4.2807

Description

CAMTA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021291240.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	CG-1	60.9	2.4e-19	4	47	74	117
CG-1 74 KvggvevlycyYahseenptfqrrcywlLeeelekivlvhylev 117 +vg+ve+l+cyYah+e+np+fqrr+yw+L+ ++e+ivlvhy+e XP_021291240.1 4 QVGNVETLNCYYAHGEQNPNFQRRSYWMLDPAYEHIVLVHYREI 47 699**************************************985 PP

Sequence ? help Back to Top
Protein Sequence Length: 223 aa Download sequence
MHDQVGNVET LNCYYAHGEQ NPNFQRRSYW MLDPAYEHIV LVHYREINET KPSSASIVQS 60 PVSSSGFSLS PNSYTSQNPG SNSLASDVHE PYQNLSSPGS VEVSSDIVIK NNGIDNTVEY 120 ASPADLQVSQ ALKRLEEQLS LNEDSFKEMS PLCSLDGDTN DSRVLEYGRE ITKQELQADL 180 LYEPNDIVQD HLYSQHTRVE NYSNTFGLLP DGGLLFFQLS KSA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G67310.1	6e-26	CAMTA family protein