PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021291296.1
Organism
Herrania umbratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
Family C2H2
Protein Properties Length: 230aa    MW: 25542.4 Da    PI: 8.8759
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021291296.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H214.69.3e-056183123
                    EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                    y+C+ C++ F++   L  H+++H
  XP_021291296.1 61 YTCSFCKREFRSAQALGGHMNVH 83
                    9********************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 230 aa     Download sequence    
MERNSFSNSL KDHSIGNKAI KDSSSNYDNQ NNFKLKDTWS SNNQGFGEDY LAGFSWPPRS  60
YTCSFCKREF RSAQALGGHM NVHRRDRARL RQSPPGDHGQ PPCLNLNLNP NPNPNLSSSP  120
LVSSPFSSTL PSLVSAPLSS LSSSSASPSH EMKKWRVNGT LMDPLSSKGS DSTNMTKGGK  180
SFYGVKEFKD YECNKFLKKT EFVKLDLDLE IGLVSDSKDD LDLELRLGYS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23130.13e-26C2H2 family protein