PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021291297.1
Organism
Herrania umbratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
Family FAR1
Protein Properties Length: 203aa    MW: 23774.8 Da    PI: 6.7232
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021291297.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR161.33e-1942125290
            FAR1   2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 
                     fY++YA++ GF +r+ +s+ks+ +g  ++r + C  +  +++e +      ++++++r +C a+++++++k+g+w+++k++++HnH+l+
  XP_021291297.1  42 FYDNYARQRGFFTRVLSSHKSELDGLLISRGLGCRGYFDNQTEVQL-----QKQEKQRESCSAMIHLRRDKTGRWVIKKFVSDHNHPLV 125
                     9*********************************998888887766.....889999******************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 203 aa     Download sequence    
MDDVDGRLEA STGDESNMHE YDSIQEPYVG MIFESEEAAK IFYDNYARQR GFFTRVLSSH  60
KSELDGLLIS RGLGCRGYFD NQTEVQLQKQ EKQRESCSAM IHLRRDKTGR WVIKKFVSDH  120
NHPLVLQLEE SCRRLDEEKD KKIQELTAEL RVKKRLSASY REQLVAFMKE VEDHNYHISM  180
KVQATLDNLK KLDAKAYELL HGR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G43280.17e-55FAR1 family protein