PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021291298.1
Organism
Herrania umbratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
Family FAR1
Protein Properties Length: 186aa    MW: 21982.1 Da    PI: 8.453
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021291298.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR161.62.4e-1925108290
            FAR1   2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 
                     fY++YA++ GF +r+ +s+ks+ +g  ++r + C  +  +++e +      ++++++r +C a+++++++k+g+w+++k++++HnH+l+
  XP_021291298.1  25 FYDNYARQRGFFTRVLSSHKSELDGLLISRGLGCRGYFDNQTEVQL-----QKQEKQRESCSAMIHLRRDKTGRWVIKKFVSDHNHPLV 108
                     9*********************************998888887766.....889999******************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 186 aa     Download sequence    
MHEYDSIQEP YVGMIFESEE AAKIFYDNYA RQRGFFTRVL SSHKSELDGL LISRGLGCRG  60
YFDNQTEVQL QKQEKQRESC SAMIHLRRDK TGRWVIKKFV SDHNHPLVLQ LEESCRRLDE  120
EKDKKIQELT AELRVKKRLS ASYREQLVAF MKEVEDHNYH ISMKVQATLD NLKKLDAKAY  180
ELLHGR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G43280.19e-55FAR1 family protein