PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021291312.1
Organism
Herrania umbratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
Family ERF
Protein Properties Length: 137aa    MW: 15261.8 Da    PI: 9.3127
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021291312.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP265.21.4e-201668156
             AP2  1 sgykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkklege 56
                    ++y+GVr+++ +g+++AeIrd    + + +r++lg+f taeeAa+a+++a+ +++g+
  XP_021291312.1 16 TRYRGVRRRP-WGKFAAEIRDS---NrHGARVWLGTFNTAEEAARAYDRAAYSMRGH 68
                    68********.**********4...3234**************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 137 aa     Download sequence    
MEGGSRGKED KEGGETRYRG VRRRPWGKFA AEIRDSNRHG ARVWLGTFNT AEEAARAYDR  60
AAYSMRGHLA ILNFPQEYPM ASGGGNANYN SSSSVGSSSS SSSSAMERGK QVFEIEYLDD  120
KLLEELLENE EKKSKKK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G43410.12e-25ERF family protein