PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021291332.1
Organism
Herrania umbratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
Family NF-YB
Protein Properties Length: 166aa    MW: 18300.4 Da    PI: 5.9962
Description NF-YB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021291332.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YB170.61.8e-5317112297
           NF-YB   2 reqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrelege 96 
                     +eq+r+lPianv+rimk++lP nakisk+aket+qecvsefisfvtseas+kc++e+rkt+ngdd++walatlGf+dy+ pl+ yl+kyreleg+
  XP_021291332.1  17 KEQERLLPIANVGRIMKQILPPNAKISKEAKETMQECVSEFISFVTSEASEKCRKERRKTVNGDDICWALATLGFDDYAVPLRRYLHKYRELEGD 111
                     89********************************************************************************************9 PP

           NF-YB  97 k 97 
                     k
  XP_021291332.1 112 K 112
                     7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 166 aa     Download sequence    
MAENAGASAS NDDGGIKEQE RLLPIANVGR IMKQILPPNA KISKEAKETM QECVSEFISF  60
VTSEASEKCR KERRKTVNGD DICWALATLG FDDYAVPLRR YLHKYRELEG DKAANQDKVG  120
NSNTDQGREE PSSYGRNQTI NQAVAPTPLK FSMIGSSNNS NLGPFN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G47810.12e-59NF-YB family protein