PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021291416.1
Organism
Herrania umbratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
Family ERF
Protein Properties Length: 151aa    MW: 17457.3 Da    PI: 8.7452
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021291416.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP263.73.9e-201970256
             AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56
                    +y+GVr+++ +g+++AeIrdps  g  +r +lg+f+taeeAa+a+++a+ +l+g+
  XP_021291416.1 19 RYRGVRRRP-WGKYAAEIRDPSRHG--ARSWLGTFDTAEEAARAYDRAAFNLRGH 70
                    59*******.**********96544..**************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 151 aa     Download sequence    
MEDPNKRKER EEKGRDEIRY RGVRRRPWGK YAAEIRDPSR HGARSWLGTF DTAEEAARAY  60
DRAAFNLRGH LAILNFPNEY YSQVMGSSSR YPASTMSSYL SSSVNAGNIS ERGSSSSSGQ  120
QKQVFEFEYL DDKVLEELLE TEEEKKKRMK D
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23230.18e-32ERF family protein